Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp8Q80U87 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm37917-201ENSMUST00000194711 392 ntBASIC12.91□□□□□ -0.34
Usp8Q80U87 Gm6983-201ENSMUST00000214912 628 ntBASIC12.91□□□□□ -0.34
Usp8Q80U87 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.91□□□□□ -0.34
Usp8Q80U87 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp8Q80U87 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp8Q80U87 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp8Q80U87 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm7488-201ENSMUST00000117148 684 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm6447-201ENSMUST00000118905 835 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Mir7654-201ENSMUST00000185082 70 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp8Q80U87 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm10576-201ENSMUST00000191927 825 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm44397-201ENSMUST00000195950 113 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm18624-201ENSMUST00000220966 658 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Gm2423-201ENSMUST00000074863 733 ntBASIC12.9□□□□□ -0.34
Usp8Q80U87 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp8Q80U87 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp8Q80U87 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp8Q80U87 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.9□□□□□ -0.35
Usp8Q80U87 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp8Q80U87 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Usp8Q80U87 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.89□□□□□ -0.35
Usp8Q80U87 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp8Q80U87 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms