Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm24447-201ENSMUST00000083977 338 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Prpf38bQ80SY5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms