Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm8885-201ENSMUST00000189382 598 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88cQ6VGS5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm27046-201ENSMUST00000182160 463 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Gm18041-201ENSMUST00000218210 618 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc88cQ6VGS5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Gm13570-201ENSMUST00000140763 309 ntBASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Gm27320-201ENSMUST00000184892 109 ntBASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc88cQ6VGS5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms