Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm4986-201ENSMUST00000119731 549 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm13350-201ENSMUST00000120519 479 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm38341-201ENSMUST00000195357 515 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gm45865-201ENSMUST00000211815 945 ntBASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nudcd1Q6PIP5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gm8738-201ENSMUST00000172606 329 ntBASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gm37489-201ENSMUST00000191883 159 ntBASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Nudcd1Q6PIP5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nudcd1Q6PIP5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Gm22323-201ENSMUST00000103832 109 ntBASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Gm11222-201ENSMUST00000119005 738 ntBASIC12.95□□□□□ -0.34
Nudcd1Q6PIP5 Gm11964-201ENSMUST00000120982 444 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms