Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.68□□□□□ -0.22
CtifQ6PEE2 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.68□□□□□ -0.22
CtifQ6PEE2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CtifQ6PEE2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gm11025-201ENSMUST00000140773 466 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.67□□□□□ -0.22
CtifQ6PEE2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CtifQ6PEE2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.66□□□□□ -0.22
CtifQ6PEE2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.66□□□□□ -0.22
CtifQ6PEE2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.66□□□□□ -0.22
CtifQ6PEE2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.66□□□□□ -0.22
CtifQ6PEE2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtifQ6PEE2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 220 ms