Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Mir339-201ENSMUST00000083659 96 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Mir874-201ENSMUST00000104769 76 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm12015-201ENSMUST00000117065 843 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm7848-201ENSMUST00000210739 718 ntBASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Snrnp40Q6PE01 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Snrnp40Q6PE01 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm18734-201ENSMUST00000172937 808 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm28882-201ENSMUST00000185504 314 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms