Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Gm19220-201ENSMUST00000222682 803 ntBASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm4Q6IRU2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm15920-201ENSMUST00000118998 402 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Gm5867-201ENSMUST00000063197 592 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm4Q6IRU2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms