Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.3■□□□□ 0.2
Clcn1Q64347 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gm4909-201ENSMUST00000118749 794 ntBASIC16.3■□□□□ 0.2
Clcn1Q64347 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.3■□□□□ 0.2
Clcn1Q64347 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.3■□□□□ 0.2
Clcn1Q64347 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Nsd1-205ENSMUST00000224693 852 ntBASIC16.3■□□□□ 0.2
Clcn1Q64347 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.3■□□□□ 0.2
Clcn1Q64347 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.3■□□□□ 0.2
Clcn1Q64347 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn1Q64347 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm22902-201ENSMUST00000158488 302 ntBASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm5904-201ENSMUST00000210286 865 ntBASIC16.29■□□□□ 0.2
Clcn1Q64347 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm8712-201ENSMUST00000221090 701 ntBASIC16.29■□□□□ 0.2
Clcn1Q64347 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.29■□□□□ 0.2
Clcn1Q64347 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn1Q64347 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Clcn1Q64347 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm11930-201ENSMUST00000117788 190 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm15276-201ENSMUST00000145953 498 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm25700-201ENSMUST00000177693 110 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn1Q64347 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn1Q64347 Gm18212-201ENSMUST00000211678 889 ntBASIC16.28■□□□□ 0.2
Clcn1Q64347 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn1Q64347 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms