Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.31□□□□□ -0.92
Ndufa4Q62425 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ndufa4Q62425 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.3□□□□□ -0.92
Ndufa4Q62425 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm44335-201ENSMUST00000196879 141 ntBASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm44297-201ENSMUST00000198304 141 ntBASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm44346-201ENSMUST00000198851 141 ntBASIC9.3□□□□□ -0.92
Ndufa4Q62425 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.3□□□□□ -0.92
Ndufa4Q62425 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ndufa4Q62425 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm12485-201ENSMUST00000119641 291 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm15693-201ENSMUST00000120470 637 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm9630-201ENSMUST00000178304 885 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm17795-201ENSMUST00000214505 757 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 Gm5779-201ENSMUST00000218467 910 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.29□□□□□ -0.92
Ndufa4Q62425 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ndufa4Q62425 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms