Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hes3Q61657 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hes3Q61657 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.08□□□□□ -0.64
Hes3Q61657 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.08□□□□□ -0.64
Hes3Q61657 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.08□□□□□ -0.64
Hes3Q61657 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hes3Q61657 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.08□□□□□ -0.64
Hes3Q61657 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.08□□□□□ -0.64
Hes3Q61657 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.08□□□□□ -0.64
Hes3Q61657 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.08□□□□□ -0.64
Hes3Q61657 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hes3Q61657 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hes3Q61657 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.08□□□□□ -0.64
Hes3Q61657 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hes3Q61657 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hes3Q61657 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.07□□□□□ -0.64
Hes3Q61657 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm15371-201ENSMUST00000117057 784 ntBASIC11.07□□□□□ -0.64
Hes3Q61657 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm27437-201ENSMUST00000183429 107 ntBASIC11.07□□□□□ -0.64
Hes3Q61657 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Mir7654-201ENSMUST00000185082 70 ntBASIC11.07□□□□□ -0.64
Hes3Q61657 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Hes3Q61657 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.07□□□□□ -0.64
Hes3Q61657 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Gm6458-201ENSMUST00000211573 635 ntBASIC11.07□□□□□ -0.64
Hes3Q61657 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Hes3Q61657 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hes3Q61657 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hes3Q61657 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hes3Q61657 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hes3Q61657 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hes3Q61657 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms