Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gm11591-201ENSMUST00000120063 702 ntBASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.12□□□□□ -0.47
Tnfaip3Q60769 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.12□□□□□ -0.47
Tnfaip3Q60769 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfaip3Q60769 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm22121-201ENSMUST00000175148 54 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm42627-201ENSMUST00000197347 224 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm8099-201ENSMUST00000200510 742 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip3Q60769 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip3Q60769 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip3Q60769 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip3Q60769 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms