Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm10434-201ENSMUST00000101158 471 ntBASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm20482-202ENSMUST00000174729 825 ntBASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm22121-201ENSMUST00000175148 54 ntBASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shroom1Q5SX79 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gm15808-201ENSMUST00000119046 604 ntBASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gm25668-201ENSMUST00000157700 129 ntBASIC13.67□□□□□ -0.22
Shroom1Q5SX79 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.67□□□□□ -0.22
Shroom1Q5SX79 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shroom1Q5SX79 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Snord83b-201ENSMUST00000104546 94 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm29199-201ENSMUST00000187766 775 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shroom1Q5SX79 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shroom1Q5SX79 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms