Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Daam2-202ENSMUST00000224595 1926 ntBASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm14921-201ENSMUST00000118643 908 ntBASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps54Q5SPW0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Vps54Q5SPW0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Vps54Q5SPW0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm6334-201ENSMUST00000207083 228 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm18935-201ENSMUST00000212692 664 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm8227-201ENSMUST00000223306 571 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm22058-201ENSMUST00000083393 310 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.39■□□□□ 0.05
Vps54Q5SPW0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Gm15370-201ENSMUST00000117158 253 ntBASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms