Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mir449b-201ENSMUST00000104833 80 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm27680-201ENSMUST00000184192 160 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm27321-201ENSMUST00000185021 205 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm44344-201ENSMUST00000200287 129 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 AC154846.1-201ENSMUST00000226278 862 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Daam2-202ENSMUST00000224595 1926 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm14767-201ENSMUST00000121559 586 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms