Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Gm7063-201ENSMUST00000186840 981 ntBASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Gm4768-201ENSMUST00000206199 686 ntBASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdkl5Q3UTQ8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdkl5Q3UTQ8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Gm4984-201ENSMUST00000115987 360 ntBASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Gm19163-201ENSMUST00000223313 780 ntBASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Cdkl5Q3UTQ8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdkl5Q3UTQ8 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.86□□□□□ -0.03
Cdkl5Q3UTQ8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdkl5Q3UTQ8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms