Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.17□□□□□ -0.62
Q3U1D9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.17□□□□□ -0.62
Q3U1D9 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.17□□□□□ -0.62
Q3U1D9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.17□□□□□ -0.62
Q3U1D9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.17□□□□□ -0.62
Q3U1D9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Q3U1D9 Gm24526-201ENSMUST00000082921 158 ntBASIC11.17□□□□□ -0.62
Q3U1D9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.17□□□□□ -0.62
Q3U1D9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.17□□□□□ -0.62
Q3U1D9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.17□□□□□ -0.62
Q3U1D9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.16□□□□□ -0.62
Q3U1D9 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.16□□□□□ -0.62
Q3U1D9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.16□□□□□ -0.62
Q3U1D9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.16□□□□□ -0.62
Q3U1D9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.16□□□□□ -0.62
Q3U1D9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.16□□□□□ -0.62
Q3U1D9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.16□□□□□ -0.62
Q3U1D9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Q3U1D9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Q3U1D9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.16□□□□□ -0.62
Q3U1D9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Q3U1D9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.15□□□□□ -0.62
Q3U1D9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Q3U1D9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Q3U1D9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Q3U1D9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Gm24255-201ENSMUST00000104481 128 ntBASIC11.15□□□□□ -0.62
Q3U1D9 Gm13316-201ENSMUST00000140537 691 ntBASIC11.15□□□□□ -0.62
Q3U1D9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Q3U1D9 Gm25668-201ENSMUST00000157700 129 ntBASIC11.15□□□□□ -0.62
Q3U1D9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.15□□□□□ -0.62
Q3U1D9 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.15□□□□□ -0.62
Q3U1D9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms