Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.62□□□□□ -0.39
Q3KNL4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.62□□□□□ -0.39
Q3KNL4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.62□□□□□ -0.39
Q3KNL4 Gm15429-201ENSMUST00000151268 798 ntBASIC12.62□□□□□ -0.39
Q3KNL4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.62□□□□□ -0.39
Q3KNL4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.62□□□□□ -0.39
Q3KNL4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.62□□□□□ -0.39
Q3KNL4 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.62□□□□□ -0.39
Q3KNL4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Gm16372-201ENSMUST00000073088 450 ntBASIC12.62□□□□□ -0.39
Q3KNL4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.62□□□□□ -0.39
Q3KNL4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Q3KNL4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Q3KNL4 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.62□□□□□ -0.39
Q3KNL4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Q3KNL4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.61□□□□□ -0.39
Q3KNL4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Mir6392-201ENSMUST00000184924 108 ntBASIC12.61□□□□□ -0.39
Q3KNL4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.61□□□□□ -0.39
Q3KNL4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Q3KNL4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.61□□□□□ -0.39
Q3KNL4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Q3KNL4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3KNL4 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.61□□□□□ -0.39
Q3KNL4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Q3KNL4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Q3KNL4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.6□□□□□ -0.39
Q3KNL4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3KNL4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Q3KNL4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.6□□□□□ -0.39
Q3KNL4 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.6□□□□□ -0.39
Q3KNL4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.6□□□□□ -0.39
Q3KNL4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3KNL4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.6□□□□□ -0.39
Q3KNL4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Q3KNL4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3KNL4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.6□□□□□ -0.39
Q3KNL4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Q3KNL4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms