Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.03□□□□□ -0.32
Ebf1Q07802 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.03□□□□□ -0.32
Ebf1Q07802 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ebf1Q07802 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ebf1Q07802 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.02□□□□□ -0.32
Ebf1Q07802 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Ebf1Q07802 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.02□□□□□ -0.32
Ebf1Q07802 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Pck2-205ENSMUST00000226352 2784 ntBASIC13.02□□□□□ -0.32
Ebf1Q07802 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf1Q07802 Gm24830-201ENSMUST00000102024 166 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm25890-201ENSMUST00000177643 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm22614-201ENSMUST00000178300 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm16505-201ENSMUST00000179981 232 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Rps4l-202ENSMUST00000204242 789 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm22042-201ENSMUST00000082989 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm26232-201ENSMUST00000083360 166 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm24136-201ENSMUST00000083374 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm26110-201ENSMUST00000083971 165 ntBASIC13.02□□□□□ -0.33
Ebf1Q07802 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf1Q07802 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf1Q07802 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Gm13316-201ENSMUST00000140537 691 ntBASIC13.01□□□□□ -0.33
Ebf1Q07802 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.01□□□□□ -0.33
Ebf1Q07802 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Gm43138-201ENSMUST00000199123 708 ntBASIC13.01□□□□□ -0.33
Ebf1Q07802 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Nsd1-205ENSMUST00000224693 852 ntBASIC13.01□□□□□ -0.33
Ebf1Q07802 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms