Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox4Q06831 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.65□□□□□ -0.38
Sox4Q06831 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Gm16379-201ENSMUST00000161469 348 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.65□□□□□ -0.38
Sox4Q06831 Gm23363-201ENSMUST00000175024 79 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 Gm38002-201ENSMUST00000193255 180 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Gm8762-201ENSMUST00000193486 339 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Gm8099-201ENSMUST00000200510 742 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.65□□□□□ -0.38
Sox4Q06831 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sox4Q06831 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Sox4Q06831 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sox4Q06831 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sox4Q06831 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sox4Q06831 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Sox4Q06831 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sox4Q06831 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox4Q06831 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.64□□□□□ -0.39
Sox4Q06831 Gm3890-201ENSMUST00000182416 207 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.64□□□□□ -0.39
Sox4Q06831 Gm42693-201ENSMUST00000196779 631 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Gm18054-201ENSMUST00000207539 555 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Gm9899-201ENSMUST00000065519 555 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox4Q06831 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Mir339-201ENSMUST00000083659 96 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sox4Q06831 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.64□□□□□ -0.39
Sox4Q06831 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sox4Q06831 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sox4Q06831 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox4Q06831 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox4Q06831 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox4Q06831 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Sox4Q06831 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox4Q06831 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms