Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.56□□□□□ -0.08
GabpaQ00422 Gm8712-201ENSMUST00000221090 701 ntBASIC14.56□□□□□ -0.08
GabpaQ00422 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GabpaQ00422 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.56□□□□□ -0.08
GabpaQ00422 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GabpaQ00422 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GabpaQ00422 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GabpaQ00422 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.56□□□□□ -0.08
GabpaQ00422 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GabpaQ00422 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GabpaQ00422 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.55□□□□□ -0.08
GabpaQ00422 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GabpaQ00422 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.55□□□□□ -0.08
GabpaQ00422 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gm15547-201ENSMUST00000122152 333 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gm16570-201ENSMUST00000161951 436 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Gm26461-201ENSMUST00000175064 290 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.55□□□□□ -0.08
GabpaQ00422 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.55□□□□□ -0.08
GabpaQ00422 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
GabpaQ00422 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GabpaQ00422 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GabpaQ00422 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
GabpaQ00422 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Gm15276-201ENSMUST00000145953 498 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GabpaQ00422 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.54□□□□□ -0.08
GabpaQ00422 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GabpaQ00422 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.54□□□□□ -0.08
GabpaQ00422 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.54□□□□□ -0.08
GabpaQ00422 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GabpaQ00422 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.54□□□□□ -0.08
GabpaQ00422 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GabpaQ00422 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GabpaQ00422 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms