Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Gm6736-201ENSMUST00000166583 948 ntBASIC11.01□□□□□ -0.65
Smn1P97801 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Gm42550-201ENSMUST00000201553 960 ntBASIC11.01□□□□□ -0.65
Smn1P97801 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.01□□□□□ -0.65
Smn1P97801 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.01□□□□□ -0.65
Smn1P97801 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smn1P97801 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Gm13722-201ENSMUST00000117964 3066 ntBASIC11□□□□□ -0.65
Smn1P97801 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11□□□□□ -0.65
Smn1P97801 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Smn1P97801 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11□□□□□ -0.65
Smn1P97801 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11□□□□□ -0.65
Smn1P97801 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11□□□□□ -0.65
Smn1P97801 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11□□□□□ -0.65
Smn1P97801 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11□□□□□ -0.65
Smn1P97801 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11□□□□□ -0.65
Smn1P97801 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11□□□□□ -0.65
Smn1P97801 Gm5279-201ENSMUST00000199575 745 ntBASIC11□□□□□ -0.65
Smn1P97801 AC132104.2-201ENSMUST00000215011 266 ntBASIC11□□□□□ -0.65
Smn1P97801 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smn1P97801 Rn7sk-201ENSMUST00000083103 331 ntBASIC11□□□□□ -0.65
Smn1P97801 Gm26315-201ENSMUST00000083890 321 ntBASIC11□□□□□ -0.65
Smn1P97801 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smn1P97801 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Gm44094-201ENSMUST00000204703 2030 ntBASIC11□□□□□ -0.65
Smn1P97801 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11□□□□□ -0.65
Smn1P97801 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smn1P97801 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11□□□□□ -0.65
Smn1P97801 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smn1P97801 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smn1P97801 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smn1P97801 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.99□□□□□ -0.65
Smn1P97801 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.99□□□□□ -0.65
Smn1P97801 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smn1P97801 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smn1P97801 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Smn1P97801 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.99□□□□□ -0.65
Smn1P97801 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.99□□□□□ -0.65
Smn1P97801 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.99□□□□□ -0.65
Smn1P97801 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smn1P97801 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms