Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.24□□□□□ -0.29
Trim43bP86448 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm15824-201ENSMUST00000119516 955 ntBASIC13.24□□□□□ -0.29
Trim43bP86448 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.24□□□□□ -0.29
Trim43bP86448 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm15429-201ENSMUST00000151268 798 ntBASIC13.24□□□□□ -0.29
Trim43bP86448 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.24□□□□□ -0.29
Trim43bP86448 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim43bP86448 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim43bP86448 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim43bP86448 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.23□□□□□ -0.29
Trim43bP86448 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim43bP86448 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim43bP86448 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim43bP86448 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim43bP86448 Gm44397-201ENSMUST00000195950 113 ntBASIC13.23□□□□□ -0.29
Trim43bP86448 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.23□□□□□ -0.29
Trim43bP86448 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Gm6983-201ENSMUST00000214912 628 ntBASIC13.23□□□□□ -0.29
Trim43bP86448 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.23□□□□□ -0.29
Trim43bP86448 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trim43bP86448 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim43bP86448 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43bP86448 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43bP86448 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim43bP86448 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim43bP86448 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Gm14127-201ENSMUST00000117906 678 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim43bP86448 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Gm17150-201ENSMUST00000165577 381 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms