Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm32025-201ENSMUST00000217960 307 ntBASIC11.46□□□□□ -0.57
H3f3aP84244 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H3f3aP84244 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
H3f3aP84244 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H3f3aP84244 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H3f3aP84244 Snora73a-201ENSMUST00000082453 205 ntBASIC11.46□□□□□ -0.57
H3f3aP84244 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
H3f3aP84244 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
H3f3aP84244 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H3f3aP84244 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
H3f3aP84244 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
H3f3aP84244 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
H3f3aP84244 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
H3f3aP84244 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
H3f3aP84244 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
H3f3aP84244 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Gm14704-201ENSMUST00000120300 874 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Gm13813-201ENSMUST00000120998 787 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
H3f3aP84244 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.45□□□□□ -0.58
H3f3aP84244 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
H3f3aP84244 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H3f3aP84244 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H3f3aP84244 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.44□□□□□ -0.58
H3f3aP84244 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
H3f3aP84244 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
H3f3aP84244 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Snora78-201ENSMUST00000158630 128 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
H3f3aP84244 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Gm18062-201ENSMUST00000208020 547 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Gm18055-201ENSMUST00000208254 547 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
H3f3aP84244 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms