Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Cux2P70298 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Gm37859-201ENSMUST00000195529 2173 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Gm21451-201ENSMUST00000111062 2775 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC20.59■□□□□ 0.89
Cux2P70298 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Gm22920-201ENSMUST00000102175 109 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Gm11511-201ENSMUST00000118146 540 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Gm15744-201ENSMUST00000161734 213 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Ighv2-1-201ENSMUST00000170946 353 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC20.59■□□□□ 0.89
Cux2P70298 Gm35713-201ENSMUST00000210516 199 ntBASIC20.59■□□□□ 0.89
Cux2P70298 CT485606.1-201ENSMUST00000213187 878 ntBASIC20.59■□□□□ 0.89
Cux2P70298 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cux2P70298 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cux2P70298 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cux2P70298 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cux2P70298 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cux2P70298 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cux2P70298 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cux2P70298 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cux2P70298 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cux2P70298 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cux2P70298 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Cux2P70298 Gm24231-201ENSMUST00000104315 133 ntBASIC20.58■□□□□ 0.88
Cux2P70298 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Cux2P70298 Gm42779-201ENSMUST00000198807 406 ntBASIC20.58■□□□□ 0.88
Cux2P70298 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Cux2P70298 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cux2P70298 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cux2P70298 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Gm13022-201ENSMUST00000121181 285 ntBASIC20.57■□□□□ 0.88
Cux2P70298 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC20.57■□□□□ 0.88
Cux2P70298 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC20.57■□□□□ 0.88
Cux2P70298 Gm38228-201ENSMUST00000193169 1293 ntBASIC20.57■□□□□ 0.88
Cux2P70298 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC20.57■□□□□ 0.88
Cux2P70298 Gm18059-201ENSMUST00000208073 580 ntBASIC20.57■□□□□ 0.88
Cux2P70298 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cux2P70298 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cux2P70298 Gm7537-201ENSMUST00000221660 1414 ntBASIC20.57■□□□□ 0.88
Cux2P70298 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cux2P70298 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC20.56■□□□□ 0.88
Cux2P70298 Gm12856-201ENSMUST00000119471 1293 ntBASIC20.56■□□□□ 0.88
Cux2P70298 Gm3551-201ENSMUST00000190750 664 ntBASIC20.56■□□□□ 0.88
Cux2P70298 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cux2P70298 Gm43610-201ENSMUST00000199117 365 ntBASIC20.56■□□□□ 0.88
Cux2P70298 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cux2P70298 Gm44421-201ENSMUST00000205064 1221 ntBASIC20.56■□□□□ 0.88
Cux2P70298 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cux2P70298 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cux2P70298 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Cux2P70298 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cux2P70298 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cux2P70298 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cux2P70298 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms