Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm12203-201ENSMUST00000118235 598 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm12209-201ENSMUST00000120089 596 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm37922-201ENSMUST00000195596 455 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Gm6091-201ENSMUST00000098307 165 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.73□□□□□ -0.69
Pdlim4P70271 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pdlim4P70271 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Pdlim4P70271 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm7561-201ENSMUST00000211203 886 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms