Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm43221-201ENSMUST00000197612 2071 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm13813-201ENSMUST00000120998 787 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm12291-201ENSMUST00000121627 311 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm5866-201ENSMUST00000177881 973 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Auts2-212ENSMUST00000178555 309 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm27701-201ENSMUST00000184498 110 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.16□□□□□ -0.14
Hmgb1P63158 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmgb1P63158 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmgb1P63158 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb1P63158 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb1P63158 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.15□□□□□ -0.14
Hmgb1P63158 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmgb1P63158 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgb1P63158 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgb1P63158 Gm28693-202ENSMUST00000190758 331 ntBASIC14.15□□□□□ -0.14
Hmgb1P63158 Gm8463-201ENSMUST00000208573 613 ntBASIC14.15□□□□□ -0.14
Hmgb1P63158 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.15□□□□□ -0.14
Hmgb1P63158 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgb1P63158 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgb1P63158 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Hmgb1P63158 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms