Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Crnkl1P63154 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.73□□□□□ -0.37
Crnkl1P63154 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.73□□□□□ -0.37
Crnkl1P63154 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Gm7775-201ENSMUST00000218871 853 ntBASIC12.73□□□□□ -0.37
Crnkl1P63154 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.73□□□□□ -0.37
Crnkl1P63154 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Crnkl1P63154 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crnkl1P63154 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm12428-201ENSMUST00000119844 727 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Crnkl1P63154 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Crnkl1P63154 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.72□□□□□ -0.37
Crnkl1P63154 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crnkl1P63154 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.71□□□□□ -0.37
Crnkl1P63154 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.71□□□□□ -0.37
Crnkl1P63154 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Crnkl1P63154 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crnkl1P63154 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms