Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm4986-201ENSMUST00000119731 549 ntBASIC12.62□□□□□ -0.39
Lhx1P63006 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.62□□□□□ -0.39
Lhx1P63006 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.62□□□□□ -0.39
Lhx1P63006 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.62□□□□□ -0.39
Lhx1P63006 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm44364-201ENSMUST00000198368 141 ntBASIC12.62□□□□□ -0.39
Lhx1P63006 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm45930-201ENSMUST00000221330 292 ntBASIC12.62□□□□□ -0.39
Lhx1P63006 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lhx1P63006 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx1P63006 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lhx1P63006 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.61□□□□□ -0.39
Lhx1P63006 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm15370-201ENSMUST00000117158 253 ntBASIC12.61□□□□□ -0.39
Lhx1P63006 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Lhx1P63006 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm27516-201ENSMUST00000184237 98 ntBASIC12.61□□□□□ -0.39
Lhx1P63006 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm8227-201ENSMUST00000223306 571 ntBASIC12.61□□□□□ -0.39
Lhx1P63006 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.61□□□□□ -0.39
Lhx1P63006 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lhx1P63006 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lhx1P63006 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Lhx1P63006 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lhx1P63006 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.6□□□□□ -0.39
Lhx1P63006 Gm13342-201ENSMUST00000121055 207 ntBASIC12.6□□□□□ -0.39
Lhx1P63006 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.6□□□□□ -0.39
Lhx1P63006 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.6□□□□□ -0.39
Lhx1P63006 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lhx1P63006 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lhx1P63006 Gm43822-201ENSMUST00000200285 476 ntBASIC12.6□□□□□ -0.39
Lhx1P63006 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.6□□□□□ -0.39
Lhx1P63006 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.6□□□□□ -0.39
Lhx1P63006 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.6□□□□□ -0.39
Lhx1P63006 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms