Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.16□□□□□ -0.3
Ybx1P62960 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ybx1P62960 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ybx1P62960 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm14130-201ENSMUST00000118417 987 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm4909-201ENSMUST00000118749 794 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm12217-201ENSMUST00000118858 696 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm15547-201ENSMUST00000122152 333 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm25043-201ENSMUST00000158604 212 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.15□□□□□ -0.3
Ybx1P62960 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm27046-201ENSMUST00000182160 463 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm44262-201ENSMUST00000204969 372 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ybx1P62960 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.15□□□□□ -0.3
Ybx1P62960 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ybx1P62960 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ybx1P62960 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ybx1P62960 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ybx1P62960 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ybx1P62960 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ybx1P62960 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.14□□□□□ -0.31
Ybx1P62960 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gm23363-201ENSMUST00000175024 79 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Mir7221-201ENSMUST00000184009 72 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.14□□□□□ -0.31
Ybx1P62960 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.14□□□□□ -0.31
Ybx1P62960 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Ybx1P62960 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ybx1P62960 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.14□□□□□ -0.31
Ybx1P62960 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ybx1P62960 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ybx1P62960 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ybx1P62960 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms