Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Rpl39P62892 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Rpl39P62892 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rpl39P62892 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Rpl39P62892 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.14□□□□□ -0.95
Rpl39P62892 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm15693-201ENSMUST00000120470 637 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.14□□□□□ -0.95
Rpl39P62892 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.14□□□□□ -0.95
Rpl39P62892 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm24447-201ENSMUST00000083977 338 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.14□□□□□ -0.95
Rpl39P62892 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rpl39P62892 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rpl39P62892 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Rpl39P62892 Cog3-203ENSMUST00000227473 4197 ntBASIC9.13□□□□□ -0.95
Rpl39P62892 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39P62892 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39P62892 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39P62892 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.13□□□□□ -0.95
Rpl39P62892 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Mir449b-201ENSMUST00000104833 80 ntBASIC9.13□□□□□ -0.95
Rpl39P62892 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.13□□□□□ -0.95
Rpl39P62892 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Rpl39P62892 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.13□□□□□ -0.95
Rpl39P62892 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39P62892 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms