Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm20445-201ENSMUST00000061905 565 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Syt7-204ENSMUST00000223586 1344 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm11978-201ENSMUST00000122315 466 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.41□□□□□ -0.58
Sf3b6P59708 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Sf3b6P59708 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3b6P59708 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm5866-201ENSMUST00000177881 973 ntBASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm9630-201ENSMUST00000178304 885 ntBASIC11.4□□□□□ -0.58
Sf3b6P59708 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm43094-201ENSMUST00000196549 921 ntBASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm19184-201ENSMUST00000196798 928 ntBASIC11.4□□□□□ -0.58
Sf3b6P59708 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm7730-201ENSMUST00000212486 454 ntBASIC11.4□□□□□ -0.58
Sf3b6P59708 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.4□□□□□ -0.58
Sf3b6P59708 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms