Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ddx6P54823 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx6P54823 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx6P54823 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Gm8712-201ENSMUST00000221090 701 ntBASIC13.05□□□□□ -0.32
Ddx6P54823 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.05□□□□□ -0.32
Ddx6P54823 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Ddx6P54823 Rubie-203ENSMUST00000227803 2430 ntBASIC13.05□□□□□ -0.32
Ddx6P54823 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.05□□□□□ -0.32
Ddx6P54823 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Ddx6P54823 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx6P54823 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx6P54823 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Ddx6P54823 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ddx6P54823 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ddx6P54823 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Gm26361-201ENSMUST00000158868 186 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Gm45186-201ENSMUST00000206874 478 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.04□□□□□ -0.32
Ddx6P54823 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ddx6P54823 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.03□□□□□ -0.32
Ddx6P54823 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx6P54823 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.03□□□□□ -0.32
Ddx6P54823 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx6P54823 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ddx6P54823 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.03□□□□□ -0.32
Ddx6P54823 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms