Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm13786-201ENSMUST00000122371 333 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.58□□□□□ -0.24
Shmt1P50431 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Shmt1P50431 Gm42627-201ENSMUST00000197347 224 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Gm43822-201ENSMUST00000200285 476 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Gm18041-201ENSMUST00000218210 618 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Gm5781-201ENSMUST00000219792 443 ntBASIC13.58□□□□□ -0.24
Shmt1P50431 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Shmt1P50431 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.58□□□□□ -0.24
Shmt1P50431 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Shmt1P50431 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Shmt1P50431 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.57□□□□□ -0.24
Shmt1P50431 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.57□□□□□ -0.24
Shmt1P50431 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm38266-201ENSMUST00000194931 421 ntBASIC13.57□□□□□ -0.24
Shmt1P50431 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm10608-202ENSMUST00000213924 676 ntBASIC13.57□□□□□ -0.24
Shmt1P50431 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.57□□□□□ -0.24
Shmt1P50431 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Shmt1P50431 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shmt1P50431 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shmt1P50431 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
Shmt1P50431 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.56□□□□□ -0.24
Shmt1P50431 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.56□□□□□ -0.24
Shmt1P50431 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Shmt1P50431 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.56□□□□□ -0.24
Shmt1P50431 Gm8227-201ENSMUST00000223306 571 ntBASIC13.56□□□□□ -0.24
Shmt1P50431 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
Shmt1P50431 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shmt1P50431 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shmt1P50431 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.56□□□□□ -0.24
Shmt1P50431 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Shmt1P50431 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Daam2-202ENSMUST00000224595 1926 ntBASIC13.56□□□□□ -0.24
Shmt1P50431 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms