Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ercc3P49135 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ercc3P49135 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.26■□□□□ 0.03
Ercc3P49135 Gm13392-201ENSMUST00000117708 150 ntBASIC15.26■□□□□ 0.03
Ercc3P49135 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.26■□□□□ 0.03
Ercc3P49135 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.26■□□□□ 0.03
Ercc3P49135 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Gm26927-201ENSMUST00000182385 965 ntBASIC15.26■□□□□ 0.03
Ercc3P49135 Gm27514-201ENSMUST00000183692 110 ntBASIC15.26■□□□□ 0.03
Ercc3P49135 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.26■□□□□ 0.03
Ercc3P49135 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.26■□□□□ 0.03
Ercc3P49135 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ercc3P49135 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ercc3P49135 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ercc3P49135 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.25■□□□□ 0.03
Ercc3P49135 Gm25927-201ENSMUST00000175058 117 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Gm5370-201ENSMUST00000187187 574 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ercc3P49135 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Ercc3P49135 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Ercc3P49135 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Gm9899-201ENSMUST00000065519 555 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.25■□□□□ 0.03
Ercc3P49135 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ercc3P49135 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ercc3P49135 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc3P49135 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.25■□□□□ 0.03
Ercc3P49135 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.24■□□□□ 0.03
Ercc3P49135 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.24■□□□□ 0.03
Ercc3P49135 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ercc3P49135 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Gm12742-201ENSMUST00000117326 410 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Gm11591-201ENSMUST00000120063 702 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.24■□□□□ 0.03
Ercc3P49135 Snora78-201ENSMUST00000158630 128 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ercc3P49135 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Gm45880-201ENSMUST00000213041 853 ntBASIC15.24■□□□□ 0.03
Ercc3P49135 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.24■□□□□ 0.03
Ercc3P49135 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc3P49135 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms