Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.06□□□□□ -0.32
Vps4bP46467 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps4bP46467 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps4bP46467 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.05□□□□□ -0.32
Vps4bP46467 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps4bP46467 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps4bP46467 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.05□□□□□ -0.32
Vps4bP46467 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps4bP46467 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps4bP46467 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps4bP46467 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps4bP46467 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.04□□□□□ -0.32
Vps4bP46467 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Vps4bP46467 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps4bP46467 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps4bP46467 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps4bP46467 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vps4bP46467 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.04□□□□□ -0.32
Vps4bP46467 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.04□□□□□ -0.32
Vps4bP46467 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.04□□□□□ -0.32
Vps4bP46467 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps4bP46467 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps4bP46467 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.04□□□□□ -0.32
Vps4bP46467 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps4bP46467 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm15806-201ENSMUST00000120696 955 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps4bP46467 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms