Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm14247-201ENSMUST00000120950 237 ntBASIC18.8■□□□□ 0.6
Chd1P40201 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd1P40201 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Gm37981-201ENSMUST00000194280 535 ntBASIC18.8■□□□□ 0.6
Chd1P40201 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC18.8■□□□□ 0.6
Chd1P40201 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd1P40201 Gm22594-201ENSMUST00000104251 130 ntBASIC18.8■□□□□ 0.6
Chd1P40201 Gm11619-201ENSMUST00000117474 237 ntBASIC18.8■□□□□ 0.6
Chd1P40201 Gm11578-201ENSMUST00000118530 459 ntBASIC18.8■□□□□ 0.6
Chd1P40201 Gm26134-201ENSMUST00000178484 110 ntBASIC18.8■□□□□ 0.6
Chd1P40201 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chd1P40201 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Gm10371-202ENSMUST00000228010 1081 ntBASIC18.8■□□□□ 0.6
Chd1P40201 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd1P40201 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Chd1P40201 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Mir181d-201ENSMUST00000102383 72 ntBASIC18.79■□□□□ 0.6
Chd1P40201 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd1P40201 Gm37852-201ENSMUST00000193027 350 ntBASIC18.79■□□□□ 0.6
Chd1P40201 Gm43854-201ENSMUST00000200418 394 ntBASIC18.79■□□□□ 0.6
Chd1P40201 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd1P40201 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Chd1P40201 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Chd1P40201 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chd1P40201 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd1P40201 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Gm37131-201ENSMUST00000192502 1561 ntBASIC18.78■□□□□ 0.6
Chd1P40201 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Gm6630-201ENSMUST00000119199 454 ntBASIC18.78■□□□□ 0.6
Chd1P40201 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Chd1P40201 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Gm18561-201ENSMUST00000206027 804 ntBASIC18.78■□□□□ 0.6
Chd1P40201 Gm6390-201ENSMUST00000215034 589 ntBASIC18.78■□□□□ 0.6
Chd1P40201 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chd1P40201 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chd1P40201 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chd1P40201 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd1P40201 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Gng5-ps-201ENSMUST00000120931 205 ntBASIC18.77■□□□□ 0.6
Chd1P40201 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC18.77■□□□□ 0.6
Chd1P40201 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.77■□□□□ 0.6
Chd1P40201 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.77■□□□□ 0.6
Chd1P40201 AC154361.2-201ENSMUST00000224747 943 ntBASIC18.77■□□□□ 0.6
Chd1P40201 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chd1P40201 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chd1P40201 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chd1P40201 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd1P40201 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms