Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Lig1P37913 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lig1P37913 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lig1P37913 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lig1P37913 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.63□□□□□ -0.07
Lig1P37913 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lig1P37913 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lig1P37913 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lig1P37913 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Gm11531-201ENSMUST00000117614 555 ntBASIC14.62□□□□□ -0.07
Lig1P37913 Gm14921-201ENSMUST00000118643 908 ntBASIC14.62□□□□□ -0.07
Lig1P37913 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.62□□□□□ -0.07
Lig1P37913 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.62□□□□□ -0.07
Lig1P37913 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.62□□□□□ -0.07
Lig1P37913 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.62□□□□□ -0.07
Lig1P37913 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Lig1P37913 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Mir5132-201ENSMUST00000175166 71 ntBASIC14.62□□□□□ -0.07
Lig1P37913 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Gm38317-201ENSMUST00000195564 343 ntBASIC14.62□□□□□ -0.07
Lig1P37913 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.62□□□□□ -0.07
Lig1P37913 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Lig1P37913 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.62□□□□□ -0.07
Lig1P37913 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lig1P37913 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lig1P37913 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.61□□□□□ -0.07
Lig1P37913 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Lig1P37913 Gm12058-201ENSMUST00000118614 437 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.61□□□□□ -0.07
Lig1P37913 Gm12291-201ENSMUST00000121627 311 ntBASIC14.61□□□□□ -0.07
Lig1P37913 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Lig1P37913 Gm38092-201ENSMUST00000195600 653 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Gm18753-201ENSMUST00000201000 566 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Gm18212-201ENSMUST00000211678 889 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.61□□□□□ -0.07
Lig1P37913 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Lig1P37913 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.61□□□□□ -0.07
Lig1P37913 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Lig1P37913 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Lig1P37913 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lig1P37913 Daam2-202ENSMUST00000224595 1926 ntBASIC14.6□□□□□ -0.07
Lig1P37913 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.6□□□□□ -0.07
Lig1P37913 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lig1P37913 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms