Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.55□□□□□ -0.24
Rfc1P35601 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.55□□□□□ -0.24
Rfc1P35601 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Gm14767-201ENSMUST00000121559 586 ntBASIC13.55□□□□□ -0.24
Rfc1P35601 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.55□□□□□ -0.24
Rfc1P35601 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.55□□□□□ -0.24
Rfc1P35601 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.55□□□□□ -0.24
Rfc1P35601 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.55□□□□□ -0.24
Rfc1P35601 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.55□□□□□ -0.24
Rfc1P35601 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfc1P35601 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfc1P35601 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rfc1P35601 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfc1P35601 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.54□□□□□ -0.24
Rfc1P35601 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.54□□□□□ -0.24
Rfc1P35601 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Mir874-201ENSMUST00000104769 76 ntBASIC13.54□□□□□ -0.24
Rfc1P35601 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rfc1P35601 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfc1P35601 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rfc1P35601 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Gm27321-201ENSMUST00000185021 205 ntBASIC13.54□□□□□ -0.24
Rfc1P35601 Gm43703-201ENSMUST00000200523 763 ntBASIC13.54□□□□□ -0.24
Rfc1P35601 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
Rfc1P35601 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfc1P35601 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfc1P35601 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rfc1P35601 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms