Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Rprl1-202ENSMUST00000198476 238 ntBASIC11.85□□□□□ -0.51
Sftpa1P35242 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Gm44126-201ENSMUST00000204831 514 ntBASIC11.85□□□□□ -0.51
Sftpa1P35242 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.85□□□□□ -0.51
Sftpa1P35242 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.85□□□□□ -0.51
Sftpa1P35242 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sftpa1P35242 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sftpa1P35242 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm24845-201ENSMUST00000158034 109 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm17040-202ENSMUST00000170597 889 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm5070-201ENSMUST00000177599 862 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Spcs1-203ENSMUST00000226374 592 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.84□□□□□ -0.51
Sftpa1P35242 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Sftpa1P35242 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sftpa1P35242 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sftpa1P35242 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sftpa1P35242 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms