Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm4984-201ENSMUST00000115987 360 ntBASIC13.16□□□□□ -0.3
Mmp13P33435 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.16□□□□□ -0.3
Mmp13P33435 Gm6244-201ENSMUST00000178732 841 ntBASIC13.16□□□□□ -0.3
Mmp13P33435 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.16□□□□□ -0.3
Mmp13P33435 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.16□□□□□ -0.3
Mmp13P33435 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp13P33435 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Mmp13P33435 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp13P33435 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp13P33435 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp13P33435 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Mmp13P33435 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp13P33435 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp13P33435 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.15□□□□□ -0.3
Mmp13P33435 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Gm43433-201ENSMUST00000196573 481 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Mmp13P33435 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Mmp13P33435 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.15□□□□□ -0.3
Mmp13P33435 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp13P33435 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp13P33435 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp13P33435 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp13P33435 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.14□□□□□ -0.31
Mmp13P33435 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Mmp13P33435 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 Gm14127-201ENSMUST00000117906 678 ntBASIC13.14□□□□□ -0.31
Mmp13P33435 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp13P33435 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp13P33435 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp13P33435 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp13P33435 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms