Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a11P31650 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a11P31650 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Slc6a11P31650 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm15198-201ENSMUST00000117283 177 ntBASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm11814-201ENSMUST00000119515 929 ntBASIC12.22□□□□□ -0.45
Slc6a11P31650 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.22□□□□□ -0.45
Slc6a11P31650 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm9257-201ENSMUST00000221254 232 ntBASIC12.22□□□□□ -0.45
Slc6a11P31650 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.22□□□□□ -0.45
Slc6a11P31650 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc6a11P31650 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Slc6a11P31650 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.21□□□□□ -0.45
Slc6a11P31650 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.21□□□□□ -0.45
Slc6a11P31650 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.21□□□□□ -0.45
Slc6a11P31650 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm43179-201ENSMUST00000198797 275 ntBASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm19078-201ENSMUST00000206311 727 ntBASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc6a11P31650 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc6a11P31650 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc6a11P31650 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc6a11P31650 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc6a11P31650 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.21□□□□□ -0.46
Slc6a11P31650 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc6a11P31650 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms