Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.81□□□□□ -0.36
Nckap1P28660 Gm22323-201ENSMUST00000103832 109 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.81□□□□□ -0.36
Nckap1P28660 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Nckap1P28660 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm14726-201ENSMUST00000120623 896 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm13316-201ENSMUST00000140537 691 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.8□□□□□ -0.36
Nckap1P28660 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nckap1P28660 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nckap1P28660 Mir433-201ENSMUST00000093564 124 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.8□□□□□ -0.36
Nckap1P28660 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nckap1P28660 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nckap1P28660 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.79□□□□□ -0.36
Nckap1P28660 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Snord83b-201ENSMUST00000104546 94 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.79□□□□□ -0.36
Nckap1P28660 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.79□□□□□ -0.36
Nckap1P28660 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nckap1P28660 Gm17376-201ENSMUST00000166016 84 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.79□□□□□ -0.36
Nckap1P28660 Gm29199-201ENSMUST00000187766 775 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Gm31256-201ENSMUST00000194705 506 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Gm30285-201ENSMUST00000214614 422 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms