Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
H2afxP27661 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
H2afxP27661 Gm24589-201ENSMUST00000116692 94 ntBASIC13.38□□□□□ -0.27
H2afxP27661 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afxP27661 Gm5425-201ENSMUST00000214125 459 ntBASIC13.38□□□□□ -0.27
H2afxP27661 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.38□□□□□ -0.27
H2afxP27661 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.38□□□□□ -0.27
H2afxP27661 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H2afxP27661 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afxP27661 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afxP27661 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.37□□□□□ -0.27
H2afxP27661 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
H2afxP27661 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afxP27661 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H2afxP27661 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afxP27661 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afxP27661 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afxP27661 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
H2afxP27661 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.37□□□□□ -0.27
H2afxP27661 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm27772-201ENSMUST00000184900 187 ntBASIC13.37□□□□□ -0.27
H2afxP27661 Gm45612-201ENSMUST00000211320 160 ntBASIC13.37□□□□□ -0.27
H2afxP27661 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
H2afxP27661 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H2afxP27661 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
H2afxP27661 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.37□□□□□ -0.27
H2afxP27661 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afxP27661 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.37□□□□□ -0.27
H2afxP27661 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.37□□□□□ -0.27
H2afxP27661 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afxP27661 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afxP27661 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms