Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Gm11424-201ENSMUST00000121929 829 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Gm12091-201ENSMUST00000146791 830 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Gm38671-201ENSMUST00000200573 130 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
Tnfrsf1aP25118 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Gm27701-201ENSMUST00000184498 110 ntBASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf1aP25118 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms