Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.36□□□□□ -0.43
BdnfP21237 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Gm5354-201ENSMUST00000182417 973 ntBASIC12.36□□□□□ -0.43
BdnfP21237 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.36□□□□□ -0.43
BdnfP21237 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
BdnfP21237 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
BdnfP21237 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.36□□□□□ -0.43
BdnfP21237 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.36□□□□□ -0.43
BdnfP21237 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
BdnfP21237 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.36□□□□□ -0.43
BdnfP21237 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
BdnfP21237 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
BdnfP21237 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Gm6447-201ENSMUST00000118905 835 ntBASIC12.35□□□□□ -0.43
BdnfP21237 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.35□□□□□ -0.43
BdnfP21237 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.35□□□□□ -0.43
BdnfP21237 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.35□□□□□ -0.43
BdnfP21237 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
BdnfP21237 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.35□□□□□ -0.43
BdnfP21237 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
BdnfP21237 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.34□□□□□ -0.43
BdnfP21237 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
BdnfP21237 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
BdnfP21237 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.34□□□□□ -0.43
BdnfP21237 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms