Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Hmgn1P18608 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm15371-201ENSMUST00000117057 784 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm26308-201ENSMUST00000157768 69 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm26035-201ENSMUST00000083065 308 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hmgn1P18608 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.75□□□□□ -0.53
Hmgn1P18608 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Hmgn1P18608 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn1P18608 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.74□□□□□ -0.53
Hmgn1P18608 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.74□□□□□ -0.53
Hmgn1P18608 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.74□□□□□ -0.53
Hmgn1P18608 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn1P18608 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn1P18608 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmgn1P18608 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn1P18608 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn1P18608 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn1P18608 Gm12291-201ENSMUST00000121627 311 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms