Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.41□□□□□ -0.42
Fv4P11370 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fv4P11370 Gm13123-201ENSMUST00000122173 492 ntBASIC12.41□□□□□ -0.42
Fv4P11370 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.41□□□□□ -0.42
Fv4P11370 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.41□□□□□ -0.42
Fv4P11370 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Mir339-201ENSMUST00000083659 96 ntBASIC12.41□□□□□ -0.42
Fv4P11370 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fv4P11370 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Fv4P11370 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Fv4P11370 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fv4P11370 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fv4P11370 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.4□□□□□ -0.42
Fv4P11370 Gm8213-201ENSMUST00000118191 441 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Gm14921-201ENSMUST00000118643 908 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Proscos-202ENSMUST00000178990 666 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Gm7287-201ENSMUST00000205267 602 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.4□□□□□ -0.42
Fv4P11370 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.4□□□□□ -0.42
Fv4P11370 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Fv4P11370 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Fv4P11370 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fv4P11370 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fv4P11370 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Fv4P11370 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.4□□□□□ -0.43
Fv4P11370 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.4□□□□□ -0.43
Fv4P11370 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fv4P11370 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.39□□□□□ -0.43
Fv4P11370 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.39□□□□□ -0.43
Fv4P11370 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.39□□□□□ -0.43
Fv4P11370 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.39□□□□□ -0.43
Fv4P11370 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.39□□□□□ -0.43
Fv4P11370 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Fv4P11370 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.39□□□□□ -0.43
Fv4P11370 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Fv4P11370 Gm10156-201ENSMUST00000122364 462 ntBASIC12.39□□□□□ -0.43
Fv4P11370 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.39□□□□□ -0.43
Fv4P11370 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.39□□□□□ -0.43
Fv4P11370 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fv4P11370 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms