Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Ccl3P10855 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ccl3P10855 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccl3P10855 Gm28882-201ENSMUST00000185504 314 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccl3P10855 Gm17812-201ENSMUST00000204935 318 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Gm39404-201ENSMUST00000216350 313 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.31□□□□□ -0.6
Ccl3P10855 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl3P10855 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccl3P10855 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccl3P10855 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Gm12015-201ENSMUST00000117065 843 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm13315-201ENSMUST00000120376 991 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccl3P10855 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Gm27552-201ENSMUST00000183351 62 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm27844-201ENSMUST00000183613 62 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm32999-201ENSMUST00000192693 562 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm18730-201ENSMUST00000218038 343 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl3P10855 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl3P10855 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.3□□□□□ -0.6
Ccl3P10855 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Ccl3P10855 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms