Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NclP09405 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NclP09405 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Gm43364-201ENSMUST00000196046 3274 ntBASIC19.05■□□□□ 0.64
NclP09405 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Gm14726-201ENSMUST00000120623 896 ntBASIC19.05■□□□□ 0.64
NclP09405 Gm8176-201ENSMUST00000191297 1099 ntBASIC19.05■□□□□ 0.64
NclP09405 Ighv1-62-201ENSMUST00000193406 350 ntBASIC19.05■□□□□ 0.64
NclP09405 Gm4959-201ENSMUST00000197271 1044 ntBASIC19.05■□□□□ 0.64
NclP09405 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NclP09405 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NclP09405 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
NclP09405 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NclP09405 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC19.04■□□□□ 0.64
NclP09405 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC19.04■□□□□ 0.64
NclP09405 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Gm15236-201ENSMUST00000117309 379 ntBASIC19.04■□□□□ 0.64
NclP09405 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Gm17376-201ENSMUST00000166016 84 ntBASIC19.04■□□□□ 0.64
NclP09405 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NclP09405 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC19.04■□□□□ 0.64
NclP09405 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Gm30285-201ENSMUST00000214614 422 ntBASIC19.04■□□□□ 0.64
NclP09405 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC19.04■□□□□ 0.64
NclP09405 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Daam2-202ENSMUST00000224595 1926 ntBASIC19.04■□□□□ 0.64
NclP09405 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NclP09405 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NclP09405 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Gm7789-202ENSMUST00000211273 1400 ntBASIC19.03■□□□□ 0.64
NclP09405 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NclP09405 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NclP09405 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.03■□□□□ 0.64
NclP09405 Gm15808-201ENSMUST00000119046 604 ntBASIC19.03■□□□□ 0.64
NclP09405 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC19.03■□□□□ 0.64
NclP09405 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC19.03■□□□□ 0.64
NclP09405 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NclP09405 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NclP09405 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NclP09405 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NclP09405 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NclP09405 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NclP09405 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC19.02■□□□□ 0.64
NclP09405 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC19.02■□□□□ 0.64
NclP09405 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Gm6652-201ENSMUST00000186414 1070 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms