Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.47□□□□□ -0.57
P06344 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.47□□□□□ -0.57
P06344 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P06344 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.47□□□□□ -0.57
P06344 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P06344 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P06344 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.46□□□□□ -0.57
P06344 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06344 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.46□□□□□ -0.57
P06344 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06344 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06344 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06344 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.46□□□□□ -0.57
P06344 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P06344 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.46□□□□□ -0.57
P06344 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.46□□□□□ -0.57
P06344 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.46□□□□□ -0.57
P06344 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.46□□□□□ -0.57
P06344 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.46□□□□□ -0.57
P06344 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.46□□□□□ -0.57
P06344 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.46□□□□□ -0.57
P06344 Gm7399-201ENSMUST00000032395 858 ntBASIC11.46□□□□□ -0.57
P06344 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P06344 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
P06344 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P06344 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P06344 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06344 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06344 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.46□□□□□ -0.58
P06344 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06344 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06344 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.46□□□□□ -0.58
P06344 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P06344 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
P06344 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.45□□□□□ -0.58
P06344 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P06344 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
P06344 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.45□□□□□ -0.58
P06344 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.45□□□□□ -0.58
P06344 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P06344 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
P06344 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.45□□□□□ -0.58
P06344 Gm14704-201ENSMUST00000120300 874 ntBASIC11.45□□□□□ -0.58
P06344 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.45□□□□□ -0.58
P06344 Gm7809-201ENSMUST00000153199 742 ntBASIC11.45□□□□□ -0.58
P06344 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.45□□□□□ -0.58
P06344 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.45□□□□□ -0.58
P06344 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.45□□□□□ -0.58
P06344 Gm43118-201ENSMUST00000199149 775 ntBASIC11.45□□□□□ -0.58
P06344 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.45□□□□□ -0.58
P06344 Gm32025-201ENSMUST00000217960 307 ntBASIC11.45□□□□□ -0.58
P06344 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P06344 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.45□□□□□ -0.58
P06344 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P06344 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P06344 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.44□□□□□ -0.58
P06344 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06344 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P06344 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P06344 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms